API Reference

API Reference#

placecell.dataset

Dataset classes for place cell analysis.

placecell.dataset.base

Base classes for place cell analysis datasets.

placecell.dataset.arena

Dataset class for 2D open-field arena place cell analysis.

placecell.dataset.maze

Dataset class for maze/arm 1D place cell analysis.

placecell.analysis.spatial_2d

Spatial analysis functions for place cells.

placecell.analysis.spatial_1d

1D spatial analysis functions for place cells in linear tracks / arms.

placecell.behavior

Behavior data spatial corrections and DLC loading.

placecell.config

Configuration models loaded from YAML.

placecell.loaders

I/O functions for loading behavior and neural data.

placecell.maze_helper

Maze behavior processing for 1D arm analysis.

placecell.neural

Neural data loading and deconvolution.

placecell.visualization

Visualization functions for place cell analysis.